Class TSubstanceNucleicAcidSubunit
Unit
bsFhir_r5
Declaration
type TSubstanceNucleicAcidSubunit = class(TBackboneElement)
Description
Nucleic acids are defined by three distinct elements: the base, sugar and linkage. Individual substance/moiety IDs will be created for each of these elements. The nucleotide sequence will be always entered in the 5’-3’ direction.
Hierarchy
Overview
Methods
Properties
Description
Methods
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constructor Create; override; |
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Properties
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property subunit : integer read Getsubunit write Setsubunit; |
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Index of linear sequences of nucleic acids in order of decreasing length. Sequences of the same length will be ordered by molecular weight. Subunits that have identical sequences will be repeated and have sequential subscripts.
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property subunitElement : Tinteger read GetsubunitElement write SetsubunitElement; |
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property sequence : string read Getsequence write Setsequence; |
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Actual nucleotide sequence notation from 5' to 3' end using standard single letter codes. In addition to the base sequence, sugar and type of phosphate or non-phosphate linkage should also be captured.
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property sequenceElement : Tstring read GetsequenceElement write SetsequenceElement; |
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property length : integer read Getlength write Setlength; |
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The length of the sequence shall be captured.
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property lengthElement : Tinteger read GetlengthElement write SetlengthElement; |
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property sequenceAttachment : TAttachment read GetsequenceAttachment write SetsequenceAttachment; |
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(TBC).
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property fivePrime : TCodeableConcept read GetfivePrime write SetfivePrime; |
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The nucleotide present at the 5’ terminal shall be specified based on a controlled vocabulary. Since the sequence is represented from the 5' to the 3' end, the 5’ prime nucleotide is the letter at the first position in the sequence. A separate representation would be redundant.
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property threePrime : TCodeableConcept read GetthreePrime write SetthreePrime; |
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The nucleotide present at the 3’ terminal shall be specified based on a controlled vocabulary. Since the sequence is represented from the 5' to the 3' end, the 5’ prime nucleotide is the letter at the last position in the sequence. A separate representation would be redundant.
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